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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs805535 chr20:37116564 T/C 9.41E-5 125 6.35 9.82 14.9 KM Plot
UCEC rs805539 chr20:37130601 C/T 9.41E-5 125 6.35 11.53 14.77 KM Plot
UCEC rs805545 chr20:37109527 T/C 9.41E-5 125 6.35 11.53 14.77 KM Plot
UCEC rs805552 chr20:37102807 C/G 8.65E-5 125 6.35 9.82 14.9 KM Plot
UCEC rs805554 chr20:37107041 A/T 9.41E-5 125 14.9 9.82 6.35 KM Plot
UCEC rs805559 chr20:37157953 A/G 0.00012 123 6.35 8.1 14.77 KM Plot
UCEC rs926487 chr20:25666737 C/T 9.97E-6 125 13.7 17.1 6.65 KM Plot
UCEC rs944062 chr9:37023718 A/T 0.000166 125 14.67 8.28 0 KM Plot
UCEC rs9584614 chr13:98236705 A/G 7.44E-7 125 11.53 4.02 15.4 KM Plot
UCEC rs9595306 chr13:45919127 A/C 0.00013 122 14.77 4.82 23.48 KM Plot
UCEC rs981440 chr20:25658088 A/G 9.97E-6 125 13.7 17.1 6.65 KM Plot
UCS rs10509592 chr10:91892863 C/G 1.85E-12 56 18.33 22.97 0.27 KM Plot
UVM rs1009454 chr20:30407699 G/A 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs10128884 chr12:132621624 C/T 4.3E-7 67 27.93 23.87 0.73 KM Plot
UVM rs10128885 chr12:132621754 G/A 4.29E-7 67 27.92 24.87 0.73 KM Plot